If you love the tangy burst of lime paired with the sweet juiciness of blueberries, then this Blueberry Lime Cheesecake Cupcakes Recipe is going to be your new favorite treat. Each cupcake is a little bite of creamy, fruity heaven, blending rich cream cheese with fresh blueberries and the bright zest of lime. These cupcakes are not only delicious but also make a stunning-looking dessert that promises to wow your friends and family at any gathering. Whether you’re baking for a special occasion or just because, this recipe hits that perfect note between refreshing and indulgent.

Ingredients You’ll Need
Simple ingredients come together to create a spectacular taste and texture in this Blueberry Lime Cheesecake Cupcakes Recipe. Each one plays a crucial role, from the all-purpose flour that forms the perfect base to the tangy lime zest that lifts the sweetness just right.
- 1 1/2 cups all-purpose flour: The foundation for your cupcake batter, ensuring a tender crumb.
- 1/2 cup unsalted butter, softened: Adds richness and moisture for that melt-in-your-mouth feel.
- 1/4 cup granulated sugar: Provides just the right amount of sweetness to balance the tang of lime.
- 1/2 teaspoon vanilla extract: Enhances the overall flavor with warm, aromatic notes.
- 8 oz cream cheese, softened: The star ingredient bringing the Cheesecake element and a luscious creaminess.
- 1/4 cup powdered sugar: Helps sweeten the cream cheese filling without graininess.
- 1 teaspoon lime zest: Packs an intense citrus punch that brightens every bite.
- 1 tablespoon lime juice: Adds just the right amount of acidity for balance and freshness.
- 1 cup blueberry preserves: Infuses the cupcakes with sweet blueberry flavor and beautiful color swirls.
- 1 cup fresh blueberries: For bursts of juicy, natural sweetness and delightful texture.
- 1/2 cup purple-tinted cream cheese frosting: Gives the cupcakes a smooth, colorful finish that’s as lovely as it is tasty.
- Lime slices and zest for garnish: Adds eye-catching appeal and a hint of extra lime aroma.
How to Make Blueberry Lime Cheesecake Cupcakes Recipe
Step 1: Prepare the Cupcake Batter
Start by preheating your oven to 350°F (175°C) and lining a muffin tin with cupcake liners. In a bowl, cream together the softened butter and granulated sugar until light and fluffy. Beat in the vanilla extract. Gradually add the flour and mix until just combined. This batter will be the tender, buttery canvas for your cheesecake filling.
Step 2: Make the Cream Cheese Filling
In a separate bowl, beat the softened cream cheese with powdered sugar until smooth and creamy. Stir in the lime zest and lime juice, which brighten the richness and add a refreshing zing. The filling should be silky and flavorful enough to stand out within each cupcake.
Step 3: Assemble the Cupcakes
Fill each cupcake liner halfway with the cupcake batter. Next, add a spoonful of the cream cheese mixture on top followed by a teaspoon of blueberry preserves and a few fresh blueberries. Then, cover with a little more cupcake batter, filling each cup about 3/4 full. This layering ensures each bite bursts with creamy, fruity surprises.
Step 4: Bake and Cool
Bake for about 20 to 25 minutes, or until a toothpick inserted near the center comes out mostly clean with only a few moist crumbs. Let the cupcakes cool in the pan for 10 minutes before transferring to a wire rack to cool completely. Cooling properly is key to maintaining the cheesecake’s perfect texture.
Step 5: Frost and Garnish
Once cooled, frost each cupcake with the purple-tinted cream cheese frosting. The color makes them fun and festive while complementing the blueberry tones. Finally, garnish with lime slices and a sprinkle of fresh lime zest to add a burst of citrus aroma and elegance.
How to Serve Blueberry Lime Cheesecake Cupcakes Recipe

Garnishes
Adding fresh lime slices and extra lime zest on top is not just for looks; it also enhances the fresh citrus fragrance that pairs beautifully with the blueberries. You can also consider a few whole blueberries or edible flowers to elevate the presentation.
Side Dishes
These cupcakes are a delightful standalone treat, but they also pair wonderfully with a light, fruity salad or a glass of sparkling lemonade to play off the citrus notes. For an adult twist, consider serving alongside a chilled glass of Moscato or a crisp Riesling.
Creative Ways to Present
Lay your cupcakes out on a rustic wooden board, or place them in pretty pastel paper liners for a springtime vibe. Another idea is to serve the cupcakes in individual clear cups with a dollop of extra blueberry preserves on the side. This adds a dash of sophistication and makes them perfect for parties.
Make Ahead and Storage
Storing Leftovers
Store your Blueberry Lime Cheesecake Cupcakes Recipe leftovers in an airtight container in the refrigerator. They will keep beautifully for up to 3 days, maintaining the freshness of the cream cheese and preserving the juicy burst of blueberries.
Freezing
If you want to save some for later, these cupcakes freeze very well without sacrificing quality. Make sure they’re wrapped tightly in plastic wrap and placed in a freezer-safe container. They can be frozen for up to 1 month. Thaw overnight in the fridge before serving.
Reheating
Since these cupcakes contain cream cheese, it’s best to enjoy them cold or at room temperature. If you prefer a slightly warmer treat, allow them to sit at room temperature for about 30 minutes rather than reheating, which can affect the texture of the cheesecake filling.
FAQs
Can I use frozen blueberries instead of fresh?
Yes, frozen blueberries can be used if fresh aren’t available. Just make sure to thaw and drain them well to prevent excess moisture from affecting the batter.
Is it possible to make these cupcakes dairy-free?
While this recipe relies on cream cheese and butter for its signature flavor and texture, you can substitute with dairy-free cream cheese and vegan butter alternatives for a dairy-free version, though the taste will be slightly different.
How long do these cupcakes last at room temperature?
Because they contain cream cheese, it’s safest to keep these cupcakes refrigerated and not leave them out at room temperature for more than 2 hours.
Can I double this Blueberry Lime Cheesecake Cupcakes Recipe?
Absolutely! Just double all the ingredients and use additional cupcake pans. Keep an eye on the baking time, as it may need a minute or two extra depending on your oven.
What can I do if I don’t have purple food coloring?
If you don’t have purple food coloring for the frosting, you can skip it or use a natural alternative like blueberry juice to create a lovely tinted frosting that matches the flavor profile.
Final Thoughts
Trust me, once you’ve made these Blueberry Lime Cheesecake Cupcakes Recipe, it’s going to be tough to go back to ordinary cupcakes. There’s something magical about the tangy lime cutting through the creamy, dreamy cheesecake filling, combined with the juicy blueberries in every bite. Perfect for celebrations or a sweet everyday pick-me-up, this recipe brings a little sunshine and lots of smiles to any kitchen. So grab your ingredients, preheat your oven, and get ready to bake a batch of pure happiness!
Print
Blueberry Lime Cheesecake Cupcakes Recipe
- Prep Time: 15 minutes
- Cook Time: 20 minutes
- Total Time: 35 minutes
- Yield: 12 cupcakes
- Category: Dessert
- Method: Baking
- Cuisine: American
Description
These Blueberry Lime Cheesecake Cupcakes combine a buttery, tender base with a smooth, lime-infused cream cheese topping and a fruity burst of fresh and preserved blueberries. Perfectly portioned for easy serving, they offer a delightful balance of tangy citrus and sweet berries, making them an irresistible treat for any occasion.
Ingredients
Cupcake Base
- 1 1/2 cups all-purpose flour
- 1/2 cup unsalted butter, softened
- 1/4 cup granulated sugar
- 1/2 teaspoon vanilla extract
Cheesecake Filling
- 8 oz cream cheese, softened
- 1/4 cup powdered sugar
- 1 teaspoon lime zest
- 1 tablespoon lime juice
Topping
- 1 cup blueberry preserves
- 1 cup fresh blueberries
- 1/2 cup purple-tinted cream cheese frosting
- Lime slices and zest for garnish
Instructions
- Prepare the Cupcake Base: In a mixing bowl, cream together the softened butter and granulated sugar until light and fluffy. Add the vanilla extract, then gradually mix in the all-purpose flour until the dough forms a crumbly but cohesive texture. Divide the mixture evenly into a cupcake tin lined with paper liners, pressing gently to form a solid base layer.
- Make the Cheesecake Filling: In a separate bowl, blend the softened cream cheese with powdered sugar, lime zest, and lime juice until smooth and creamy. Spoon this filling over the cupcake base layer, smoothing the top to cover the base completely.
- Add Blueberries and Bake: Place a tablespoon of blueberry preserves on top of the cheesecake filling, then sprinkle fresh blueberries evenly. Bake the cupcakes at 350°F (175°C) for approximately 20 minutes or until the cheesecake filling is set and edges are lightly golden.
- Cool and Frost: Once baked, allow the cupcakes to cool completely in the tin to room temperature. After cooling, pipe or spread the purple-tinted cream cheese frosting on top of each cupcake to create an attractive and flavorful finish.
- Garnish and Serve: Garnish cupcakes with thin lime slices and extra lime zest for added color and zestiness. Serve chilled or at room temperature for best flavor.
Notes
- Ensure cream cheese and butter are softened to room temperature to achieve a smooth, creamy texture without lumps.
- Fresh blueberries add texture and freshness, while preserves boost sweetness and berry flavor.
- The purple-tinted frosting can be made by adding a few drops of natural food coloring or blueberry juice to cream cheese frosting.
- These cupcakes can be refrigerated for up to 3 days in an airtight container.
- To prevent cracking, avoid overbaking the cheesecake filling layer.

